Dca55954.1
Annotation
- 4-exons
- f-1
- sp|F6I4L2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g02380#unknown#0F0P0C
- AT3G62770.1 | Symbols: AtATG18a | Transducin/WD40 repeat-like superfamily protein | chr3:23218858-23221110 REVERSE LENGTH=425
- Repeat List (scaffold7860)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55954.1 |
12 |
356 |
366 |
60.65 |
345 |
63 |
1e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I4L2_VITVI |
70 |
424 |
425 |
83.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55954.1 |
16 |
353 |
366 |
56.83 |
338 |
61 |
4e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G62770.1 |
81 |
421 |
425 |
80.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7860 |
Augustus |
mRNA |
2284 |
4572 |
. |
+ |
. |
ID=Dca55954.1;Parent=Dca55954 |
| scaffold7860 |
Augustus |
exon |
2284 |
2931 |
. |
+ |
. |
ID=Dca55954.1.exon1;Parent=Dca55954.1 |
| scaffold7860 |
Augustus |
exon |
3513 |
3720 |
. |
+ |
. |
ID=Dca55954.1.exon2;Parent=Dca55954.1 |
| scaffold7860 |
Augustus |
exon |
4109 |
4235 |
. |
+ |
. |
ID=Dca55954.1.exon3;Parent=Dca55954.1 |
| scaffold7860 |
Augustus |
exon |
4455 |
4572 |
. |
+ |
. |
ID=Dca55954.1.exon4;Parent=Dca55954.1 |
