Dca55972.1
Annotation
- 4-exons
- f-1
- sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
- Repeat List (scaffold787)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55972.1 |
324 |
413 |
647 |
8.03 |
90 |
58 |
5e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5F1_BETVU |
491 |
580 |
1399 |
6.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55972.1 |
47 |
337 |
647 |
16.84 |
291 |
36 |
5e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0271500-01 |
36 |
334 |
349 |
85.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold787 |
Augustus |
mRNA |
22095 |
25515 |
. |
+ |
. |
ID=Dca55972.1;Parent=Dca55972 |
| scaffold787 |
Augustus |
exon |
22095 |
23106 |
. |
+ |
. |
ID=Dca55972.1.exon1;Parent=Dca55972.1 |
| scaffold787 |
Augustus |
exon |
23679 |
23887 |
. |
+ |
. |
ID=Dca55972.1.exon2;Parent=Dca55972.1 |
| scaffold787 |
Augustus |
exon |
24706 |
25052 |
. |
+ |
. |
ID=Dca55972.1.exon3;Parent=Dca55972.1 |
| scaffold787 |
Augustus |
exon |
25140 |
25515 |
. |
+ |
. |
ID=Dca55972.1.exon4;Parent=Dca55972.1 |
