Dca55983.1
Annotation
- 3-exons
- f-1
- sp|Q8LMY8_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0013H08.5#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold787)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55983.1 |
10 |
701 |
743 |
50.06 |
692 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8LMY8_ORYSJ |
746 |
1473 |
1584 |
45.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55983.1 |
6 |
218 |
743 |
12.11 |
213 |
43 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
473 |
684 |
1401 |
15.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold787 |
Augustus |
mRNA |
140790 |
143712 |
. |
- |
. |
ID=Dca55983.1;Parent=Dca55983 |
| scaffold787 |
Augustus |
exon |
140790 |
140917 |
. |
- |
. |
ID=Dca55983.1.exon1;Parent=Dca55983.1 |
| scaffold787 |
Augustus |
exon |
141118 |
142599 |
. |
- |
. |
ID=Dca55983.1.exon2;Parent=Dca55983.1 |
| scaffold787 |
Augustus |
exon |
143091 |
143712 |
. |
- |
. |
ID=Dca55983.1.exon3;Parent=Dca55983.1 |
