Carnation DB

Dca56003.1

Annotation

8-exons
f-1
sp|B9HY23_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_881806#GO:0005622;GO:0003676;GO:0000166;GO:0008270#3F0P1C
AT1G50300.1 | Symbols: TAF15 | TBP-associated factor 15 | chr1:18628818-18631662 REVERSE LENGTH=372
Repeat List (scaffold788)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56003.1	1	383	405	65.43	383	68	3e-122
Target_name	Start	End	Length	Cov(%)
sp\|B9HY23_POPTR	1	387	387	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56003.1	8	321	405	54.81	314	71	3e-108
Target_name	Start	End	Length	Cov(%)
AT1G50300.1	3	312	372	83.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold788	Augustus	mRNA	28196	31836	.	-	.	ID=Dca56003.1;Parent=Dca56003
scaffold788	Augustus	exon	28196	28268	.	-	.	ID=Dca56003.1.exon1;Parent=Dca56003.1
scaffold788	Augustus	exon	28449	28647	.	-	.	ID=Dca56003.1.exon2;Parent=Dca56003.1
scaffold788	Augustus	exon	28959	29085	.	-	.	ID=Dca56003.1.exon3;Parent=Dca56003.1
scaffold788	Augustus	exon	29184	29265	.	-	.	ID=Dca56003.1.exon4;Parent=Dca56003.1
scaffold788	Augustus	exon	30248	30331	.	-	.	ID=Dca56003.1.exon5;Parent=Dca56003.1
scaffold788	Augustus	exon	30967	31158	.	-	.	ID=Dca56003.1.exon6;Parent=Dca56003.1
scaffold788	Augustus	exon	31278	31618	.	-	.	ID=Dca56003.1.exon7;Parent=Dca56003.1
scaffold788	Augustus	exon	31717	31836	.	-	.	ID=Dca56003.1.exon8;Parent=Dca56003.1