Carnation DB

Dca56072.1

Annotation

9-exons
f-1
sp|B9GZT1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_712237#unknown#0F0P0C
sp|G7INV7_MEDTR#CD2 antigen cytoplasmic tail-binding protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g008810#unknown#0F0P0C
Repeat List (scaffold79)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56072.1	12	368	379	53.82	357	56	5e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9GZT1_POPTR	5	346	354	96.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56072.1	6	371	379	48.02	366	49	1e-72
Target_name	Start	End	Length	Cov(%)
AT5G09390.1	4	345	351	97.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold79	Augustus	mRNA	152127	156601	.	-	.	ID=Dca56072.1;Parent=Dca56072
scaffold79	Augustus	exon	152127	152202	.	-	.	ID=Dca56072.1.exon1;Parent=Dca56072.1
scaffold79	Augustus	exon	152943	153020	.	-	.	ID=Dca56072.1.exon2;Parent=Dca56072.1
scaffold79	Augustus	exon	153143	153362	.	-	.	ID=Dca56072.1.exon3;Parent=Dca56072.1
scaffold79	Augustus	exon	153795	153836	.	-	.	ID=Dca56072.1.exon4;Parent=Dca56072.1
scaffold79	Augustus	exon	153936	154065	.	-	.	ID=Dca56072.1.exon5;Parent=Dca56072.1
scaffold79	Augustus	exon	154278	154430	.	-	.	ID=Dca56072.1.exon6;Parent=Dca56072.1
scaffold79	Augustus	exon	154533	154658	.	-	.	ID=Dca56072.1.exon7;Parent=Dca56072.1
scaffold79	Augustus	exon	156194	156425	.	-	.	ID=Dca56072.1.exon8;Parent=Dca56072.1
scaffold79	Augustus	exon	156519	156601	.	-	.	ID=Dca56072.1.exon9;Parent=Dca56072.1