Carnation DB

Dca56076.1

Annotation

5-exons
f-1
sp|B9GF90_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_797515#GO:0003677;GO:0003887;GO:0006260#2F1P0C
sp|D7L064_ARALL#PHP domain-containing protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_899610#GO:0003677;GO:0003887;GO:0006260#2F1P0C
Repeat List (scaffold79)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56076.1	26	419	420	61.19	394	63	2e-136
Target_name	Start	End	Length	Cov(%)
sp\|B9GF90_POPTR	1	400	408	98.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56076.1	21	418	420	54.52	398	56	8e-128
Target_name	Start	End	Length	Cov(%)
AT2G13840.1	17	423	434	93.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold79	Augustus	mRNA	171871	174534	.	-	.	ID=Dca56076.1;Parent=Dca56076
scaffold79	Augustus	exon	171871	172241	.	-	.	ID=Dca56076.1.exon1;Parent=Dca56076.1
scaffold79	Augustus	exon	172392	172561	.	-	.	ID=Dca56076.1.exon2;Parent=Dca56076.1
scaffold79	Augustus	exon	172661	172924	.	-	.	ID=Dca56076.1.exon3;Parent=Dca56076.1
scaffold79	Augustus	exon	173058	173215	.	-	.	ID=Dca56076.1.exon4;Parent=Dca56076.1
scaffold79	Augustus	exon	174235	174534	.	-	.	ID=Dca56076.1.exon5;Parent=Dca56076.1