Carnation DB

Dca56077.1

Annotation

7-exons
f-1
sp|D7SYM8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0109g00360#GO:0009707;GO:0005525;GO:0015450;GO:0006886#2F1P1C
AT5G05000.2 | Symbols: TOC34, ATTOC34, OEP34 | translocon at the outer envelope membrane of chloroplasts 34 | chr5:1474262-1475772 REVERSE LENGTH=313
Repeat List (scaffold79)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56077.1	1	303	312	72.11	303	75	1e-130
Target_name	Start	End	Length	Cov(%)
sp\|D7SYM8_VITVI	1	304	310	98.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56077.1	2	310	312	65.06	309	66	3e-121
Target_name	Start	End	Length	Cov(%)
AT5G05000.2	3	312	313	99.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold79	Augustus	mRNA	177660	180050	.	+	.	ID=Dca56077.1;Parent=Dca56077
scaffold79	Augustus	exon	177660	177758	.	+	.	ID=Dca56077.1.exon1;Parent=Dca56077.1
scaffold79	Augus-PASA	exon	177874	177981	.	+	.	ID=Dca56077.1.exon2;Parent=Dca56077.1
scaffold79	Augus-PASA	exon	178574	178698	.	+	.	ID=Dca56077.1.exon3;Parent=Dca56077.1
scaffold79	Augus-PASA	exon	178827	179091	.	+	.	ID=Dca56077.1.exon4;Parent=Dca56077.1
scaffold79	Augus-PASA	exon	179173	179241	.	+	.	ID=Dca56077.1.exon5;Parent=Dca56077.1
scaffold79	Augus-PASA	exon	179331	179492	.	+	.	ID=Dca56077.1.exon6;Parent=Dca56077.1
scaffold79	Augus-PASA	exon	179940	180050	.	+	.	ID=Dca56077.1.exon7;Parent=Dca56077.1