Carnation DB

Dca5608.1

Annotation

5-exons
f-1
sp|A5B385_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040647#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Repeat List (scaffold12163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5608.1	478	553	985	3.35	76	44	3e-09
Target_name	Start	End	Length	Cov(%)
sp\|A5B385_VITVI	193	266	1795	4.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5608.1	716	980	985	9.03	265	30	1e-29
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	546	830	1539	18.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12163	Augustus	mRNA	3282	6606	.	-	.	ID=Dca5608.1;Parent=Dca5608
scaffold12163	Augustus	exon	3282	3643	.	-	.	ID=Dca5608.1.exon1;Parent=Dca5608.1
scaffold12163	Augustus	exon	3728	4640	.	-	.	ID=Dca5608.1.exon2;Parent=Dca5608.1
scaffold12163	Augustus	exon	4736	5159	.	-	.	ID=Dca5608.1.exon3;Parent=Dca5608.1
scaffold12163	Augustus	exon	5249	6183	.	-	.	ID=Dca5608.1.exon4;Parent=Dca5608.1
scaffold12163	Augustus	exon	6283	6606	.	-	.	ID=Dca5608.1.exon5;Parent=Dca5608.1