Carnation DB

Dca56082.1

Annotation

6-exons
f-1
sp|B9HRB6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821121#GO:0016021;GO:0046923;GO:0006621#1F1P1C
Os08t0548200-02 Similar to ER lumen protein retaining receptor-like protein.
Repeat List (scaffold79)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56082.1	1	272	272	86.39	272	87	3e-140
Target_name	Start	End	Length	Cov(%)
sp\|B9HRB6_POPTR	1	272	272	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56082.1	1	272	272	83.45	272	84	7e-136
Target_name	Start	End	Length	Cov(%)
Os08t0548200-02	1	272	273	99.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold79	Augus-PASA	mRNA	200941	204502	.	-	.	ID=Dca56082.1;Parent=Dca56082
scaffold79	Augus-PASA	exon	200941	200989	.	-	.	ID=Dca56082.1.exon1;Parent=Dca56082.1
scaffold79	Augus-PASA	exon	201080	201204	.	-	.	ID=Dca56082.1.exon2;Parent=Dca56082.1
scaffold79	Augus-PASA	exon	201609	201689	.	-	.	ID=Dca56082.1.exon3;Parent=Dca56082.1
scaffold79	Augus-PASA	exon	201773	201913	.	-	.	ID=Dca56082.1.exon4;Parent=Dca56082.1
scaffold79	Augus-PASA	exon	202351	202550	.	-	.	ID=Dca56082.1.exon5;Parent=Dca56082.1
scaffold79	Augus-PASA	exon	204280	204502	.	-	.	ID=Dca56082.1.exon6;Parent=Dca56082.1