Dca56086.1
Annotation
- 4-exons
- f-1
- sp|B9HRA9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_200898#unknown#0F0P0C
- AT3G19860.2 | Symbols: bHLH121 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:6903842-6905863 FORWARD LENGTH=337
- Repeat List (scaffold79)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56086.1 |
23 |
266 |
302 |
44.7 |
244 |
54 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HRA9_POPTR |
1 |
246 |
283 |
86.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56086.1 |
23 |
299 |
302 |
45.69 |
277 |
49 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G19860.2 |
56 |
331 |
337 |
81.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold79 |
Augus-PASA |
mRNA |
223232 |
224850 |
. |
- |
. |
ID=Dca56086.1;Parent=Dca56086 |
| scaffold79 |
Augus-PASA |
exon |
223232 |
223384 |
. |
- |
. |
ID=Dca56086.1.exon1;Parent=Dca56086.1 |
| scaffold79 |
Augus-PASA |
exon |
223513 |
223983 |
. |
- |
. |
ID=Dca56086.1.exon2;Parent=Dca56086.1 |
| scaffold79 |
Augus-PASA |
exon |
224054 |
224181 |
. |
- |
. |
ID=Dca56086.1.exon3;Parent=Dca56086.1 |
| scaffold79 |
Augustus |
exon |
224694 |
224850 |
. |
- |
. |
ID=Dca56086.1.exon4;Parent=Dca56086.1 |
