Carnation DB

Dca56097.1

Annotation

6-exons
f-1
sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|Q33AJ4_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g09610#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
Repeat List (scaffold79)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56097.1	253	484	647	11.59	232	33	1e-23
Target_name	Start	End	Length	Cov(%)
sp\|F4NCH8_BETVU	991	1203	1365	15.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56097.1	18	251	647	13.44	234	33	7e-33
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	250	517	857	31.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold79	Augustus	mRNA	315736	319256	.	-	.	ID=Dca56097.1;Parent=Dca56097
scaffold79	Augustus	exon	315736	315993	.	-	.	ID=Dca56097.1.exon1;Parent=Dca56097.1
scaffold79	Augustus	exon	316113	316237	.	-	.	ID=Dca56097.1.exon2;Parent=Dca56097.1
scaffold79	Augustus	exon	316315	317119	.	-	.	ID=Dca56097.1.exon3;Parent=Dca56097.1
scaffold79	Augustus	exon	318266	318789	.	-	.	ID=Dca56097.1.exon4;Parent=Dca56097.1
scaffold79	Augustus	exon	318939	319154	.	-	.	ID=Dca56097.1.exon5;Parent=Dca56097.1
scaffold79	Augustus	exon	319241	319256	.	-	.	ID=Dca56097.1.exon6;Parent=Dca56097.1