Carnation DB

Dca56133.1

Annotation

6-exons
f-1
sp|Q9SJP3_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15380#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
Repeat List (scaffold791)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56133.1	246	376	377	12.73	131	37	6e-16
Target_name	Start	End	Length	Cov(%)
sp\|Q9SJP3_ARATH	1174	1306	1311	10.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56133.1	254	377	377	10.34	124	31	2e-07
Target_name	Start	End	Length	Cov(%)
AT4G09490.1	33	159	170	74.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold791	Augustus	mRNA	1244	12468	.	+	.	ID=Dca56133.1;Parent=Dca56133
scaffold791	Augustus	exon	1244	1375	.	+	.	ID=Dca56133.1.exon1;Parent=Dca56133.1
scaffold791	Augustus	exon	1573	1641	.	+	.	ID=Dca56133.1.exon2;Parent=Dca56133.1
scaffold791	Augustus	exon	7100	7253	.	+	.	ID=Dca56133.1.exon3;Parent=Dca56133.1
scaffold791	Augustus	exon	7362	7535	.	+	.	ID=Dca56133.1.exon4;Parent=Dca56133.1
scaffold791	Augustus	exon	8677	8759	.	+	.	ID=Dca56133.1.exon5;Parent=Dca56133.1
scaffold791	Augustus	exon	11947	12468	.	+	.	ID=Dca56133.1.exon6;Parent=Dca56133.1