Dca56189.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7924)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56189.1 |
1 |
460 |
470 |
59.57 |
460 |
59 |
3e-154
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
698 |
1157 |
1313 |
35.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56189.1 |
1 |
131 |
470 |
8.72 |
131 |
31 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
797 |
1428 |
9.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7924 |
Augustus |
mRNA |
1143 |
2732 |
. |
- |
. |
ID=Dca56189.1;Parent=Dca56189 |
| scaffold7924 |
Augustus |
exon |
1143 |
1749 |
. |
- |
. |
ID=Dca56189.1.exon1;Parent=Dca56189.1 |
| scaffold7924 |
Augustus |
exon |
1816 |
2472 |
. |
- |
. |
ID=Dca56189.1.exon2;Parent=Dca56189.1 |
| scaffold7924 |
Augustus |
exon |
2584 |
2732 |
. |
- |
. |
ID=Dca56189.1.exon3;Parent=Dca56189.1 |
