Carnation DB

Dca56245.1

Annotation

6-exons
f-1
sp|A5ANZ7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013670#GO:0005525;GO:0017111;GO:0006614#2F1P0C
Os08t0480100-01 Signal recognition particle receptor, alpha subunit, N-terminal domain containing protein.
Repeat List (scaffold7941)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56245.1	27	202	202	65.34	176	66	3e-61
Target_name	Start	End	Length	Cov(%)
sp\|A5ANZ7_VITVI	9	202	313	61.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56245.1	27	202	202	60.89	176	61	2e-61
Target_name	Start	End	Length	Cov(%)
Os08t0480100-01	320	513	625	31.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7941	Augustus	mRNA	589	3072	.	-	.	ID=Dca56245.1;Parent=Dca56245
scaffold7941	Augustus	exon	589	708	.	-	.	ID=Dca56245.1.exon1;Parent=Dca56245.1
scaffold7941	Augustus	exon	808	838	.	-	.	ID=Dca56245.1.exon2;Parent=Dca56245.1
scaffold7941	Augustus	exon	991	1142	.	-	.	ID=Dca56245.1.exon3;Parent=Dca56245.1
scaffold7941	Augustus	exon	1739	1834	.	-	.	ID=Dca56245.1.exon4;Parent=Dca56245.1
scaffold7941	Augustus	exon	2218	2302	.	-	.	ID=Dca56245.1.exon5;Parent=Dca56245.1
scaffold7941	Augustus	exon	2951	3072	.	-	.	ID=Dca56245.1.exon6;Parent=Dca56245.1