Carnation DB

Dca56274.1

Annotation

6-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|Q01LT3_ORYSA#OSIGBa0116O04.4 protein#Oryza sativa (Rice)#Name=OSIGBa0116O04.4#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
Repeat List (scaffold7950)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56274.1	94	208	635	8.5	115	47	8e-22
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	377	489	1553	7.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56274.1	251	626	635	23.46	376	39	1e-71
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	411	792	1539	24.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7950	Augustus	mRNA	8901	17871	.	-	.	ID=Dca56274.1;Parent=Dca56274
scaffold7950	Augustus	exon	8901	9693	.	-	.	ID=Dca56274.1.exon1;Parent=Dca56274.1
scaffold7950	Augustus	exon	9790	10273	.	-	.	ID=Dca56274.1.exon2;Parent=Dca56274.1
scaffold7950	Augustus	exon	10628	11057	.	-	.	ID=Dca56274.1.exon3;Parent=Dca56274.1
scaffold7950	Augustus	exon	16744	16790	.	-	.	ID=Dca56274.1.exon4;Parent=Dca56274.1
scaffold7950	Augustus	exon	17526	17662	.	-	.	ID=Dca56274.1.exon5;Parent=Dca56274.1
scaffold7950	Augustus	exon	17855	17871	.	-	.	ID=Dca56274.1.exon6;Parent=Dca56274.1