Dca56329.1
Annotation
- 2-exons
- f-1
- sp|Q9XIH8_ARATH#Putative non-LTR retrolelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16110#GO:0003964#1F0P0C
- Repeat List (scaffold797)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56329.1 |
30 |
144 |
193 |
20.72 |
115 |
35 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9XIH8_ARATH |
120 |
230 |
323 |
34.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56329.1 |
48 |
134 |
193 |
17.09 |
87 |
38 |
5e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43730.1 |
131 |
217 |
320 |
27.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold797 |
Augustus |
mRNA |
75038 |
78108 |
. |
+ |
. |
ID=Dca56329.1;Parent=Dca56329 |
| scaffold797 |
Augustus |
exon |
75038 |
75524 |
. |
+ |
. |
ID=Dca56329.1.exon1;Parent=Dca56329.1 |
| scaffold797 |
Augustus |
exon |
78014 |
78108 |
. |
+ |
. |
ID=Dca56329.1.exon2;Parent=Dca56329.1 |
