Dca56333.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7970)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56333.1 |
1 |
194 |
298 |
34.89 |
194 |
52 |
4e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
455 |
964 |
20.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56333.1 |
1 |
126 |
298 |
16.44 |
126 |
37 |
7e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
801 |
1428 |
9.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7970 |
Augustus |
mRNA |
11767 |
16416 |
. |
+ |
. |
ID=Dca56333.1;Parent=Dca56333 |
| scaffold7970 |
Augustus |
exon |
11767 |
12355 |
. |
+ |
. |
ID=Dca56333.1.exon1;Parent=Dca56333.1 |
| scaffold7970 |
Augustus |
exon |
16109 |
16416 |
. |
+ |
. |
ID=Dca56333.1.exon2;Parent=Dca56333.1 |
