Dca56344.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7975)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56344.1 |
330 |
522 |
523 |
26 |
193 |
71 |
1e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
703 |
895 |
964 |
20.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56344.1 |
368 |
522 |
523 |
11.28 |
155 |
38 |
2e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1203 |
1355 |
1428 |
10.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7975 |
Augustus |
mRNA |
9946 |
12935 |
. |
- |
. |
ID=Dca56344.1;Parent=Dca56344 |
| scaffold7975 |
Augustus |
exon |
9946 |
10531 |
. |
- |
. |
ID=Dca56344.1.exon1;Parent=Dca56344.1 |
| scaffold7975 |
Augustus |
exon |
11446 |
12312 |
. |
- |
. |
ID=Dca56344.1.exon2;Parent=Dca56344.1 |
| scaffold7975 |
Augustus |
exon |
12817 |
12935 |
. |
- |
. |
ID=Dca56344.1.exon3;Parent=Dca56344.1 |
