Dca56504.1
Annotation
- 4-exons
- f-1
- sp|B9GNI9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_756236#GO:0005488#1F0P0C
- AT5G48850.1 | Symbols: ATSDI1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:19805576-19807699 REVERSE LENGTH=306
- Repeat List (scaffold8)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56504.1 |
8 |
306 |
306 |
71.24 |
299 |
73 |
1e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GNI9_POPTR |
12 |
309 |
309 |
96.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56504.1 |
24 |
306 |
306 |
65.03 |
283 |
70 |
7e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48850.1 |
23 |
306 |
306 |
92.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8 |
Augustus |
mRNA |
581438 |
583903 |
. |
+ |
. |
ID=Dca56504.1;Parent=Dca56504 |
| scaffold8 |
Augustus |
exon |
581438 |
581581 |
. |
+ |
. |
ID=Dca56504.1.exon1;Parent=Dca56504.1 |
| scaffold8 |
Augustus |
exon |
582670 |
582882 |
. |
+ |
. |
ID=Dca56504.1.exon2;Parent=Dca56504.1 |
| scaffold8 |
Augustus |
exon |
583020 |
583175 |
. |
+ |
. |
ID=Dca56504.1.exon3;Parent=Dca56504.1 |
| scaffold8 |
Augustus |
exon |
583496 |
583903 |
. |
+ |
. |
ID=Dca56504.1.exon4;Parent=Dca56504.1 |
