Carnation DB

Dca56508.1

Annotation

20-exons
f-1
sp|B9GR98_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816957#GO:0005488#1F0P0C
Os02t0617300-02 Armadillo-like helical domain containing protein.
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56508.1	1	1419	1419	72.23	1419	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GR98_POPTR	1	1425	1426	99.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56508.1	1	1417	1419	68.99	1417	68	0
Target_name	Start	End	Length	Cov(%)
AT2G20190.1	1	1437	1439	99.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augustus	mRNA	620359	631231	.	-	.	ID=Dca56508.1;Parent=Dca56508
scaffold8	Augustus	exon	620359	620517	.	-	.	ID=Dca56508.1.exon1;Parent=Dca56508.1
scaffold8	Augustus	exon	620615	620716	.	-	.	ID=Dca56508.1.exon2;Parent=Dca56508.1
scaffold8	Augustus	exon	620857	620925	.	-	.	ID=Dca56508.1.exon3;Parent=Dca56508.1
scaffold8	Augustus	exon	621008	621076	.	-	.	ID=Dca56508.1.exon4;Parent=Dca56508.1
scaffold8	Augustus	exon	621152	621226	.	-	.	ID=Dca56508.1.exon5;Parent=Dca56508.1
scaffold8	Augustus	exon	621350	621454	.	-	.	ID=Dca56508.1.exon6;Parent=Dca56508.1
scaffold8	Augustus	exon	621986	622087	.	-	.	ID=Dca56508.1.exon7;Parent=Dca56508.1
scaffold8	Augustus	exon	622384	624194	.	-	.	ID=Dca56508.1.exon8;Parent=Dca56508.1
scaffold8	Augustus	exon	624350	624698	.	-	.	ID=Dca56508.1.exon9;Parent=Dca56508.1
scaffold8	Augustus	exon	624816	624914	.	-	.	ID=Dca56508.1.exon10;Parent=Dca56508.1
scaffold8	Augustus	exon	626076	626193	.	-	.	ID=Dca56508.1.exon11;Parent=Dca56508.1
scaffold8	Augustus	exon	626274	626359	.	-	.	ID=Dca56508.1.exon12;Parent=Dca56508.1
scaffold8	Augustus	exon	626448	626516	.	-	.	ID=Dca56508.1.exon13;Parent=Dca56508.1
scaffold8	Augustus	exon	627414	627511	.	-	.	ID=Dca56508.1.exon14;Parent=Dca56508.1
scaffold8	Augustus	exon	627642	627803	.	-	.	ID=Dca56508.1.exon15;Parent=Dca56508.1
scaffold8	Augustus	exon	628096	628261	.	-	.	ID=Dca56508.1.exon16;Parent=Dca56508.1
scaffold8	Augustus	exon	628457	628525	.	-	.	ID=Dca56508.1.exon17;Parent=Dca56508.1
scaffold8	Augustus	exon	629678	629740	.	-	.	ID=Dca56508.1.exon18;Parent=Dca56508.1
scaffold8	Augustus	exon	629885	630040	.	-	.	ID=Dca56508.1.exon19;Parent=Dca56508.1
scaffold8	Augustus	exon	630899	631231	.	-	.	ID=Dca56508.1.exon20;Parent=Dca56508.1