Carnation DB

Dca5653.1

Annotation

5-exons
f-1
sp|Q8S805_ORYSJ#Putative copia-type polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0020E23.19#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold1219)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5653.1	191	661	707	30.97	471	42	2e-101
Target_name	Start	End	Length	Cov(%)
sp\|Q8S805_ORYSJ	738	1255	1803	28.72

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1219	Augustus	mRNA	48278	51887	.	+	.	ID=Dca5653.1;Parent=Dca5653
scaffold1219	Augustus	exon	48278	48436	.	+	.	ID=Dca5653.1.exon1;Parent=Dca5653.1
scaffold1219	Augustus	exon	48529	48762	.	+	.	ID=Dca5653.1.exon2;Parent=Dca5653.1
scaffold1219	Augustus	exon	48928	49087	.	+	.	ID=Dca5653.1.exon3;Parent=Dca5653.1
scaffold1219	Augustus	exon	50143	50882	.	+	.	ID=Dca5653.1.exon4;Parent=Dca5653.1
scaffold1219	Augustus	exon	51057	51887	.	+	.	ID=Dca5653.1.exon5;Parent=Dca5653.1