Carnation DB

Dca56586.1

Annotation

9-exons
f-1
sp|B9GL51_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_815032#GO:0050662;GO:0000166;GO:0003978;GO:0006012#3F1P0C
AT4G10960.1 | Symbols: UGE5 | UDP-D-glucose/UDP-D-galactose 4-epimerase 5 | chr4:6716083-6718472 REVERSE LENGTH=351
Repeat List (scaffold800)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56586.1	1	345	348	85.63	345	87	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GL51_POPTR	1	345	348	99.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56586.1	1	346	348	81.6	346	83	1e-173
Target_name	Start	End	Length	Cov(%)
AT4G10960.1	2	347	351	98.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold800	Augus-PASA	mRNA	89702	94032	.	+	.	ID=Dca56586.1;Parent=Dca56586
scaffold800	Augus-PASA	exon	89702	89884	.	+	.	ID=Dca56586.1.exon1;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	91445	91494	.	+	.	ID=Dca56586.1.exon2;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	91901	92036	.	+	.	ID=Dca56586.1.exon3;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	92412	92513	.	+	.	ID=Dca56586.1.exon4;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	92638	92865	.	+	.	ID=Dca56586.1.exon5;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	92970	93048	.	+	.	ID=Dca56586.1.exon6;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	93192	93274	.	+	.	ID=Dca56586.1.exon7;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	93583	93674	.	+	.	ID=Dca56586.1.exon8;Parent=Dca56586.1
scaffold800	Augus-PASA	exon	93939	94032	.	+	.	ID=Dca56586.1.exon9;Parent=Dca56586.1