Carnation DB

Dca56644.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold802)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56644.1	190	960	984	37.19	771	47	0
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	9	758	1717	43.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56644.1	682	804	984	4.16	123	33	8e-10
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	66	189	192	64.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold802	Augustus	mRNA	24895	32121	.	-	.	ID=Dca56644.1;Parent=Dca56644
scaffold802	Augustus	exon	24895	25115	.	-	.	ID=Dca56644.1.exon1;Parent=Dca56644.1
scaffold802	Augustus	exon	25225	25926	.	-	.	ID=Dca56644.1.exon2;Parent=Dca56644.1
scaffold802	Augustus	exon	25996	27603	.	-	.	ID=Dca56644.1.exon3;Parent=Dca56644.1
scaffold802	Augustus	exon	31509	31708	.	-	.	ID=Dca56644.1.exon4;Parent=Dca56644.1
scaffold802	Augustus	exon	31898	32121	.	-	.	ID=Dca56644.1.exon5;Parent=Dca56644.1