Dca56673.1
Annotation
- 3-exons
- f-1
- sp|A5AMX0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040055#GO:0003676;GO:0015074#1F1P0C
- sp|Q2QTW2_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g18320#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8029)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56673.1 |
1 |
177 |
185 |
49.18 |
177 |
41 |
4e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AMX0_VITVI |
151 |
374 |
374 |
59.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8029 |
Augustus |
mRNA |
11637 |
12414 |
. |
- |
. |
ID=Dca56673.1;Parent=Dca56673 |
| scaffold8029 |
Augustus |
exon |
11637 |
11846 |
. |
- |
. |
ID=Dca56673.1.exon1;Parent=Dca56673.1 |
| scaffold8029 |
Augustus |
exon |
11955 |
12089 |
. |
- |
. |
ID=Dca56673.1.exon2;Parent=Dca56673.1 |
| scaffold8029 |
Augustus |
exon |
12202 |
12414 |
. |
- |
. |
ID=Dca56673.1.exon3;Parent=Dca56673.1 |
