Carnation DB

Dca5670.1

Annotation

8-exons
f-1
sp|F6GV03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04940#GO:0003677;GO:0006355#1F1P0C
sp|D9ZJ81_MALDO#MYBR domain class transcription factor#Malus domestica (Apple) (Pyrus malus)#Name=MYBR20#GO:0003677;GO:0006355#1F1P0C
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5670.1	66	553	557	51.7	488	58	2e-144
Target_name	Start	End	Length	Cov(%)
sp\|F6GV03_VITVI	208	696	696	70.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5670.1	54	552	557	43.08	499	47	6e-106
Target_name	Start	End	Length	Cov(%)
Os03t0274300-01	192	691	693	72.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augustus	mRNA	32278	35178	.	-	.	ID=Dca5670.1;Parent=Dca5670
scaffold122	Augustus	exon	32278	32472	.	-	.	ID=Dca5670.1.exon1;Parent=Dca5670.1
scaffold122	Augustus	exon	33067	33130	.	-	.	ID=Dca5670.1.exon2;Parent=Dca5670.1
scaffold122	Augustus	exon	33271	33597	.	-	.	ID=Dca5670.1.exon3;Parent=Dca5670.1
scaffold122	Augustus	exon	33682	33929	.	-	.	ID=Dca5670.1.exon4;Parent=Dca5670.1
scaffold122	Augustus	exon	34058	34137	.	-	.	ID=Dca5670.1.exon5;Parent=Dca5670.1
scaffold122	Augustus	exon	34239	34301	.	-	.	ID=Dca5670.1.exon6;Parent=Dca5670.1
scaffold122	Augustus	exon	34379	34576	.	-	.	ID=Dca5670.1.exon7;Parent=Dca5670.1
scaffold122	Augustus	exon	34680	35178	.	-	.	ID=Dca5670.1.exon8;Parent=Dca5670.1