Dca56715.1
Annotation
- 3-exons
- f-1
- sp|Q7DLW4_ARATH#Non-ltr retrotransposon reverse transcriptase-like protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold8045)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56715.1 |
379 |
871 |
871 |
21.92 |
493 |
36 |
5e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7DLW4_ARATH |
89 |
617 |
893 |
59.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56715.1 |
426 |
791 |
871 |
15.38 |
366 |
33 |
2e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
222 |
620 |
626 |
63.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8045 |
Augustus |
mRNA |
3300 |
6264 |
. |
- |
. |
ID=Dca56715.1;Parent=Dca56715 |
| scaffold8045 |
Augustus |
exon |
3300 |
4220 |
. |
- |
. |
ID=Dca56715.1.exon1;Parent=Dca56715.1 |
| scaffold8045 |
Augustus |
exon |
4305 |
4885 |
. |
- |
. |
ID=Dca56715.1.exon2;Parent=Dca56715.1 |
| scaffold8045 |
Augustus |
exon |
5151 |
6264 |
. |
- |
. |
ID=Dca56715.1.exon3;Parent=Dca56715.1 |
