Carnation DB

Dca5680.1

Annotation

6-exons
f-1
sp|B9GJM9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_549167#GO:0005524;GO:0004674#2F0P0C
AT2G28930.1 | Symbols: APK1B, PK1B | protein kinase 1B | chr2:12424957-12426565 FORWARD LENGTH=423
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5680.1	1	405	405	77.03	405	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GJM9_POPTR	1	405	405	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5680.1	18	403	405	66.91	386	69	3e-158
Target_name	Start	End	Length	Cov(%)
AT2G28930.1	26	421	423	93.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augus-PASA	mRNA	101672	104296	.	-	.	ID=Dca5680.1;Parent=Dca5680
scaffold122	Augus-PASA	exon	101672	102120	.	-	.	ID=Dca5680.1.exon1;Parent=Dca5680.1
scaffold122	Augus-PASA	exon	102335	102458	.	-	.	ID=Dca5680.1.exon2;Parent=Dca5680.1
scaffold122	Augus-PASA	exon	102579	102715	.	-	.	ID=Dca5680.1.exon3;Parent=Dca5680.1
scaffold122	Augus-PASA	exon	102810	102945	.	-	.	ID=Dca5680.1.exon4;Parent=Dca5680.1
scaffold122	Augustus	exon	103196	103515	.	-	.	ID=Dca5680.1.exon5;Parent=Dca5680.1
scaffold122	Augustus	exon	104245	104296	.	-	.	ID=Dca5680.1.exon6;Parent=Dca5680.1