Dca5682.1
Annotation
- 3-exons
- f-1
- sp|A9PAN4_POPTR#Methyl binding domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MBD905#GO:0005634;GO:0003677#1F0P1C
- Repeat List (scaffold122)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5682.1 |
6 |
137 |
145 |
38.62 |
132 |
40 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PAN4_POPTR |
19 |
151 |
214 |
62.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5682.1 |
8 |
108 |
145 |
31.72 |
101 |
39 |
6e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G59380.1 |
11 |
129 |
225 |
52.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold122 |
Augustus |
mRNA |
115124 |
117566 |
. |
- |
. |
ID=Dca5682.1;Parent=Dca5682 |
| scaffold122 |
Augustus |
exon |
115124 |
115189 |
. |
- |
. |
ID=Dca5682.1.exon1;Parent=Dca5682.1 |
| scaffold122 |
Augustus |
exon |
115298 |
115423 |
. |
- |
. |
ID=Dca5682.1.exon2;Parent=Dca5682.1 |
| scaffold122 |
Augustus |
exon |
117321 |
117566 |
. |
- |
. |
ID=Dca5682.1.exon3;Parent=Dca5682.1 |
