Carnation DB

Dca5683.1

Annotation

9-exons
f-1
sp|D7TKV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00070#GO:0004488;GO:0000166;GO:0009396#2F1P0C
Os09t0327300-01 Similar to Plastid 5,10-methylene-tetrahydrofolate dehydrogenase (Fragment).
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5683.1	336	630	631	29.31	295	63	2e-110
Target_name	Start	End	Length	Cov(%)
sp\|D7TKV5_VITVI	63	357	358	82.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5683.1	320	630	631	29.47	311	59	4e-106
Target_name	Start	End	Length	Cov(%)
Os09t0327300-01	72	388	396	80.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augustus	mRNA	122166	127506	.	+	.	ID=Dca5683.1;Parent=Dca5683
scaffold122	Augustus	exon	122166	122268	.	+	.	ID=Dca5683.1.exon1;Parent=Dca5683.1
scaffold122	Augustus	exon	123757	124076	.	+	.	ID=Dca5683.1.exon2;Parent=Dca5683.1
scaffold122	Augustus	exon	124402	124638	.	+	.	ID=Dca5683.1.exon3;Parent=Dca5683.1
scaffold122	Augustus	exon	124731	124898	.	+	.	ID=Dca5683.1.exon4;Parent=Dca5683.1
scaffold122	Augustus	exon	125029	125197	.	+	.	ID=Dca5683.1.exon5;Parent=Dca5683.1
scaffold122	Augustus	exon	126061	126383	.	+	.	ID=Dca5683.1.exon6;Parent=Dca5683.1
scaffold122	Augustus	exon	126710	126946	.	+	.	ID=Dca5683.1.exon7;Parent=Dca5683.1
scaffold122	Augustus	exon	127051	127218	.	+	.	ID=Dca5683.1.exon8;Parent=Dca5683.1
scaffold122	Augustus	exon	127336	127506	.	+	.	ID=Dca5683.1.exon9;Parent=Dca5683.1