Carnation DB

Dca56859.1

Annotation

6-exons
f-1
sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
Repeat List (scaffold8093)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56859.1	55	655	784	46.04	601	57	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AUE6_VITVI	355	935	2026	28.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56859.1	46	655	784	27.8	610	33	2e-76
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	573	1220	1401	46.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8093	Augustus	mRNA	345	6010	.	-	.	ID=Dca56859.1;Parent=Dca56859
scaffold8093	Augustus	exon	345	701	.	-	.	ID=Dca56859.1.exon1;Parent=Dca56859.1
scaffold8093	Augustus	exon	3286	3324	.	-	.	ID=Dca56859.1.exon2;Parent=Dca56859.1
scaffold8093	Augustus	exon	3413	4912	.	-	.	ID=Dca56859.1.exon3;Parent=Dca56859.1
scaffold8093	Augustus	exon	5023	5150	.	-	.	ID=Dca56859.1.exon4;Parent=Dca56859.1
scaffold8093	Augustus	exon	5385	5560	.	-	.	ID=Dca56859.1.exon5;Parent=Dca56859.1
scaffold8093	Augustus	exon	5856	6010	.	-	.	ID=Dca56859.1.exon6;Parent=Dca56859.1