Carnation DB

Dca56895.1

Annotation

5-exons
f-1
sp|F6HVW4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0164g00040#unknown#0F0P0C
AT1G34220.1 | Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr1:12463102-12465911 REVERSE LENGTH=649
Repeat List (scaffold81)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56895.1	1	506	515	57.28	506	56	6e-126
Target_name	Start	End	Length	Cov(%)
sp\|F6HVW4_VITVI	37	532	539	92.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56895.1	1	227	515	31.45	227	72	1e-94
Target_name	Start	End	Length	Cov(%)
Os08t0175200-01	41	267	562	40.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold81	Augustus	mRNA	204543	207357	.	+	.	ID=Dca56895.1;Parent=Dca56895
scaffold81	Augustus	exon	204543	204617	.	+	.	ID=Dca56895.1.exon1;Parent=Dca56895.1
scaffold81	Augus-PASA	exon	204722	204825	.	+	.	ID=Dca56895.1.exon2;Parent=Dca56895.1
scaffold81	Augus-PASA	exon	205797	205968	.	+	.	ID=Dca56895.1.exon3;Parent=Dca56895.1
scaffold81	Augus-PASA	exon	206081	206221	.	+	.	ID=Dca56895.1.exon4;Parent=Dca56895.1
scaffold81	Augus-PASA	exon	206302	207357	.	+	.	ID=Dca56895.1.exon5;Parent=Dca56895.1