Carnation DB

Dca5692.1

Annotation

6-exons
f-1
sp|B9HTJ9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_227541#GO:0016881;GO:0005524#2F0P0C
AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 | chr5:23919868-23921304 REVERSE LENGTH=203
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5692.1	5	168	168	85.71	164	88	3e-84
Target_name	Start	End	Length	Cov(%)
sp\|B9HTJ9_POPTR	1	164	164	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5692.1	5	168	168	86.3	164	89	2e-79
Target_name	Start	End	Length	Cov(%)
AT5G59300.1	40	203	203	80.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augus-PASA	mRNA	199810	201979	.	+	.	ID=Dca5692.1;Parent=Dca5692
scaffold122	Augus-PASA	exon	199810	199858	.	+	.	ID=Dca5692.1.exon1;Parent=Dca5692.1
scaffold122	Augus-PASA	exon	199999	200101	.	+	.	ID=Dca5692.1.exon2;Parent=Dca5692.1
scaffold122	Augus-PASA	exon	200702	200799	.	+	.	ID=Dca5692.1.exon3;Parent=Dca5692.1
scaffold122	Augus-PASA	exon	200914	201014	.	+	.	ID=Dca5692.1.exon4;Parent=Dca5692.1
scaffold122	Augus-PASA	exon	201167	201244	.	+	.	ID=Dca5692.1.exon5;Parent=Dca5692.1
scaffold122	Augus-PASA	exon	201902	201979	.	+	.	ID=Dca5692.1.exon6;Parent=Dca5692.1