Carnation DB

Dca56923.1

Annotation

13-exons
f-1
sp|B9HA46_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819597#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein | chr5:3553334-3556646 FORWARD LENGTH=427
Repeat List (scaffold810)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56923.1	48	475	475	83.36	428	93	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HA46_POPTR	1	428	428	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56923.1	48	475	475	81.68	428	91	0
Target_name	Start	End	Length	Cov(%)
AT5G11170.1	1	427	427	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold810	Augustus	mRNA	72278	80067	.	-	.	ID=Dca56923.1;Parent=Dca56923
scaffold810	Augustus	exon	72278	72288	.	-	.	ID=Dca56923.1.exon1;Parent=Dca56923.1
scaffold810	Augustus	exon	73458	73521	.	-	.	ID=Dca56923.1.exon2;Parent=Dca56923.1
scaffold810	Augustus	exon	73654	73737	.	-	.	ID=Dca56923.1.exon3;Parent=Dca56923.1
scaffold810	Augustus	exon	73825	73969	.	-	.	ID=Dca56923.1.exon4;Parent=Dca56923.1
scaffold810	Augustus	exon	74622	74806	.	-	.	ID=Dca56923.1.exon5;Parent=Dca56923.1
scaffold810	Augustus	exon	74907	74963	.	-	.	ID=Dca56923.1.exon6;Parent=Dca56923.1
scaffold810	Augustus	exon	75611	75729	.	-	.	ID=Dca56923.1.exon7;Parent=Dca56923.1
scaffold810	Augustus	exon	75832	76063	.	-	.	ID=Dca56923.1.exon8;Parent=Dca56923.1
scaffold810	Augustus	exon	76170	76342	.	-	.	ID=Dca56923.1.exon9;Parent=Dca56923.1
scaffold810	Augus-PASA	exon	77364	77464	.	-	.	ID=Dca56923.1.exon10;Parent=Dca56923.1
scaffold810	Augus-PASA	exon	78249	78368	.	-	.	ID=Dca56923.1.exon11;Parent=Dca56923.1
scaffold810	Augustus	exon	78555	78609	.	-	.	ID=Dca56923.1.exon12;Parent=Dca56923.1
scaffold810	Augustus	exon	79986	80067	.	-	.	ID=Dca56923.1.exon13;Parent=Dca56923.1