Dca56939.1
Annotation
- 4-exons
- f-1
- sp|Q9SL12_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold8108)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
No data
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56939.1 |
584 |
724 |
797 |
7.15 |
141 |
41 |
3e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
1 |
141 |
746 |
18.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8108 |
Augustus |
mRNA |
5591 |
9140 |
. |
+ |
. |
ID=Dca56939.1;Parent=Dca56939 |
| scaffold8108 |
Augustus |
exon |
5591 |
6298 |
. |
+ |
. |
ID=Dca56939.1.exon1;Parent=Dca56939.1 |
| scaffold8108 |
Augustus |
exon |
6538 |
7378 |
. |
+ |
. |
ID=Dca56939.1.exon2;Parent=Dca56939.1 |
| scaffold8108 |
Augustus |
exon |
7625 |
7696 |
. |
+ |
. |
ID=Dca56939.1.exon3;Parent=Dca56939.1 |
| scaffold8108 |
Augustus |
exon |
8368 |
9140 |
. |
+ |
. |
ID=Dca56939.1.exon4;Parent=Dca56939.1 |
