Dca56943.1
Annotation
- 4-exons
- f-1
- sp|Q688L2_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=P0636E04.8#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold811)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56943.1 |
17 |
191 |
1386 |
4.11 |
175 |
32 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q688L2_ORYSJ |
164 |
336 |
1679 |
10.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56943.1 |
320 |
1336 |
1386 |
24.81 |
1017 |
33 |
5e-148
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
347 |
1379 |
1428 |
72.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold811 |
Augustus |
mRNA |
8020 |
14741 |
. |
+ |
. |
ID=Dca56943.1;Parent=Dca56943 |
| scaffold811 |
Augustus |
exon |
8020 |
8857 |
. |
+ |
. |
ID=Dca56943.1.exon1;Parent=Dca56943.1 |
| scaffold811 |
Augustus |
exon |
8936 |
12108 |
. |
+ |
. |
ID=Dca56943.1.exon2;Parent=Dca56943.1 |
| scaffold811 |
Augustus |
exon |
14198 |
14323 |
. |
+ |
. |
ID=Dca56943.1.exon3;Parent=Dca56943.1 |
| scaffold811 |
Augustus |
exon |
14718 |
14741 |
. |
+ |
. |
ID=Dca56943.1.exon4;Parent=Dca56943.1 |
