Carnation DB

Dca56949.1

Annotation

8-exons
f-1
sp|B9RL20_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0942390#unknown#0F0P0C
AT3G10650.1 | Symbols: | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). | chr3:3325562-3330819 REVERSE LENGTH=1309
Repeat List (scaffold811)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56949.1	918	1044	1044	5.74	127	42	1e-09
Target_name	Start	End	Length	Cov(%)
sp\|B9RL20_RICCO	1098	1240	1241	11.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56949.1	20	424	1044	13.31	405	31	1e-36
Target_name	Start	End	Length	Cov(%)
AT3G10650.1	22	434	1309	31.55

seqname	source	feature	start	end	score	strand	frame	group
scaffold811	Augustus	mRNA	52763	62276	.	-	.	ID=Dca56949.1;Parent=Dca56949
scaffold811	Augustus	exon	52763	54008	.	-	.	ID=Dca56949.1.exon1;Parent=Dca56949.1
scaffold811	Augustus	exon	54499	54890	.	-	.	ID=Dca56949.1.exon2;Parent=Dca56949.1
scaffold811	Augustus	exon	55404	55943	.	-	.	ID=Dca56949.1.exon3;Parent=Dca56949.1
scaffold811	Augustus	exon	56024	56104	.	-	.	ID=Dca56949.1.exon4;Parent=Dca56949.1
scaffold811	Augustus	exon	56183	56485	.	-	.	ID=Dca56949.1.exon5;Parent=Dca56949.1
scaffold811	Augustus	exon	56600	56807	.	-	.	ID=Dca56949.1.exon6;Parent=Dca56949.1
scaffold811	Augustus	exon	58674	58749	.	-	.	ID=Dca56949.1.exon7;Parent=Dca56949.1
scaffold811	Augustus	exon	61988	62276	.	-	.	ID=Dca56949.1.exon8;Parent=Dca56949.1