Dca5700.1
Annotation
- 2-exons
- f-1
- sp|B9HBE5_POPTR#Histone H2A#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HTA915#GO:0000786;GO:0005634;GO:0003677;GO:0006334#1F1P2C
- Repeat List (scaffold122)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5700.1 |
16 |
147 |
147 |
71.42 |
132 |
77 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HBE5_POPTR |
1 |
136 |
136 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5700.1 |
4 |
147 |
147 |
72.78 |
144 |
62 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G02560.2 |
3 |
177 |
177 |
98.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold122 |
Augustus |
mRNA |
257647 |
258294 |
. |
+ |
. |
ID=Dca5700.1;Parent=Dca5700 |
| scaffold122 |
Augustus |
exon |
257647 |
257788 |
. |
+ |
. |
ID=Dca5700.1.exon1;Parent=Dca5700.1 |
| scaffold122 |
Augustus |
exon |
257993 |
258294 |
. |
+ |
. |
ID=Dca5700.1.exon2;Parent=Dca5700.1 |
