Carnation DB

Dca57048.1

Annotation

14-exons
f-1
sp|F6GWJ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0029g01200#GO:0005737;GO:0005524;GO:0004825;GO:0000049;GO:0006431#3F1P1C
Os10t0400100-01 Methionyl-tRNA synthetase, class Ia domain containing protein.
Repeat List (scaffold8148)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57048.1	1	55	70	41.42	55	53	4e-07
Target_name	Start	End	Length	Cov(%)
sp\|D7TTM6_VITVI	84	138	157	35.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57048.1	3	609	609	79.47	607	80	0
Target_name	Start	End	Length	Cov(%)
AT4G13780.1	4	609	797	76.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8148	Augustus	mRNA	1652	7276	.	-	.	ID=Dca57048.1;Parent=Dca57048
scaffold8148	Augustus	exon	1652	1766	.	-	.	ID=Dca57048.1.exon1;Parent=Dca57048.1
scaffold8148	Augustus	exon	2003	2143	.	-	.	ID=Dca57048.1.exon2;Parent=Dca57048.1
scaffold8148	Augustus	exon	2242	2370	.	-	.	ID=Dca57048.1.exon3;Parent=Dca57048.1
scaffold8148	Augustus	exon	2501	2566	.	-	.	ID=Dca57048.1.exon4;Parent=Dca57048.1
scaffold8148	Augustus	exon	2648	2766	.	-	.	ID=Dca57048.1.exon5;Parent=Dca57048.1
scaffold8148	Augustus	exon	3154	3268	.	-	.	ID=Dca57048.1.exon6;Parent=Dca57048.1
scaffold8148	Augustus	exon	3354	3460	.	-	.	ID=Dca57048.1.exon7;Parent=Dca57048.1
scaffold8148	Augustus	exon	3626	3716	.	-	.	ID=Dca57048.1.exon8;Parent=Dca57048.1
scaffold8148	Augustus	exon	4376	4519	.	-	.	ID=Dca57048.1.exon9;Parent=Dca57048.1
scaffold8148	Augustus	exon	4647	4877	.	-	.	ID=Dca57048.1.exon10;Parent=Dca57048.1
scaffold8148	Augustus	exon	5158	5313	.	-	.	ID=Dca57048.1.exon11;Parent=Dca57048.1
scaffold8148	Augustus	exon	5425	5578	.	-	.	ID=Dca57048.1.exon12;Parent=Dca57048.1
scaffold8148	Augustus	exon	6730	6874	.	-	.	ID=Dca57048.1.exon13;Parent=Dca57048.1
scaffold8148	Augustus	exon	7162	7276	.	-	.	ID=Dca57048.1.exon14;Parent=Dca57048.1