Dca57097.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold8161)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57097.1 |
2 |
180 |
531 |
11.29 |
179 |
34 |
5e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
83 |
250 |
1717 |
9.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57097.1 |
271 |
362 |
531 |
5.83 |
92 |
34 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
188 |
192 |
47.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8161 |
Augustus |
mRNA |
920 |
10016 |
. |
+ |
. |
ID=Dca57097.1;Parent=Dca57097 |
| scaffold8161 |
Augustus |
exon |
920 |
1357 |
. |
+ |
. |
ID=Dca57097.1.exon1;Parent=Dca57097.1 |
| scaffold8161 |
Augustus |
exon |
5878 |
6526 |
. |
+ |
. |
ID=Dca57097.1.exon2;Parent=Dca57097.1 |
| scaffold8161 |
Augustus |
exon |
7062 |
7289 |
. |
+ |
. |
ID=Dca57097.1.exon3;Parent=Dca57097.1 |
| scaffold8161 |
Augustus |
exon |
9736 |
10016 |
. |
+ |
. |
ID=Dca57097.1.exon4;Parent=Dca57097.1 |
