Dca57192.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold8199)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57192.1 |
300 |
476 |
499 |
11.82 |
177 |
32 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
298 |
474 |
964 |
18.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57192.1 |
259 |
368 |
499 |
7.61 |
110 |
34 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
492 |
604 |
1428 |
7.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8199 |
Augustus |
mRNA |
9425 |
11521 |
. |
+ |
. |
ID=Dca57192.1;Parent=Dca57192 |
| scaffold8199 |
Augustus |
exon |
9425 |
10136 |
. |
+ |
. |
ID=Dca57192.1.exon1;Parent=Dca57192.1 |
| scaffold8199 |
Augustus |
exon |
10216 |
10581 |
. |
+ |
. |
ID=Dca57192.1.exon2;Parent=Dca57192.1 |
| scaffold8199 |
Augustus |
exon |
11100 |
11521 |
. |
+ |
. |
ID=Dca57192.1.exon3;Parent=Dca57192.1 |
