Carnation DB

Dca57207.1

Annotation

7-exons
f-1
sp|A5BYQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g01850#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
AT5G46860.1 | Symbols: VAM3, ATVAM3, SYP22, ATSYP22, SGR3 | Syntaxin/t-SNARE family protein | chr5:19012342-19013795 REVERSE LENGTH=268
Repeat List (scaffold82)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57207.1	1	263	275	82.9	263	87	1e-129
Target_name	Start	End	Length	Cov(%)
sp\|A5BYQ4_VITVI	1	262	274	95.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57207.1	1	263	275	72.72	263	77	1e-113
Target_name	Start	End	Length	Cov(%)
AT5G46860.1	1	256	268	95.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold82	Augustus	mRNA	79285	82807	.	-	.	ID=Dca57207.1;Parent=Dca57207
scaffold82	Augustus	exon	79285	79350	.	-	.	ID=Dca57207.1.exon1;Parent=Dca57207.1
scaffold82	Augustus	exon	79619	79719	.	-	.	ID=Dca57207.1.exon2;Parent=Dca57207.1
scaffold82	Augustus	exon	79829	79986	.	-	.	ID=Dca57207.1.exon3;Parent=Dca57207.1
scaffold82	Augustus	exon	80077	80151	.	-	.	ID=Dca57207.1.exon4;Parent=Dca57207.1
scaffold82	Augustus	exon	80555	80694	.	-	.	ID=Dca57207.1.exon5;Parent=Dca57207.1
scaffold82	Augustus	exon	80856	80949	.	-	.	ID=Dca57207.1.exon6;Parent=Dca57207.1
scaffold82	Augustus	exon	82614	82807	.	-	.	ID=Dca57207.1.exon7;Parent=Dca57207.1