Carnation DB

Dca57221.1

Annotation

8-exons
f-1
sp|F6HJ96_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0150g00600#GO:0005488#1F0P0C
sp|B9RG44_RICCO#Sil1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1439010#GO:0005488#1F0P0C
Repeat List (scaffold82)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57221.1	27	393	393	64.12	367	69	4e-143
Target_name	Start	End	Length	Cov(%)
sp\|F6HJ96_VITVI	6	374	374	98.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57221.1	10	385	393	56.23	376	59	2e-122
Target_name	Start	End	Length	Cov(%)
AT3G51980.1	10	379	382	96.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold82	Augus-PASA	mRNA	186947	189873	.	-	.	ID=Dca57221.1;Parent=Dca57221
scaffold82	Augus-PASA	exon	186947	186967	.	-	.	ID=Dca57221.1.exon1;Parent=Dca57221.1
scaffold82	Augus-PASA	exon	187076	187282	.	-	.	ID=Dca57221.1.exon2;Parent=Dca57221.1
scaffold82	Augus-PASA	exon	187401	187586	.	-	.	ID=Dca57221.1.exon3;Parent=Dca57221.1
scaffold82	Augus-PASA	exon	187721	187879	.	-	.	ID=Dca57221.1.exon4;Parent=Dca57221.1
scaffold82	Augus-PASA	exon	188168	188295	.	-	.	ID=Dca57221.1.exon5;Parent=Dca57221.1
scaffold82	Augus-PASA	exon	188595	188745	.	-	.	ID=Dca57221.1.exon6;Parent=Dca57221.1
scaffold82	Augus-PASA	exon	189331	189422	.	-	.	ID=Dca57221.1.exon7;Parent=Dca57221.1
scaffold82	Augustus	exon	189636	189873	.	-	.	ID=Dca57221.1.exon8;Parent=Dca57221.1