Carnation DB

Dca57230.1

Annotation

5-exons
f-1
sp|B9MU83_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_676614#unknown#0F0P0C
AT4G19003.2 | Symbols: VPS25 | E2F/DP family winged-helix DNA-binding domain | chr4:10407571-10408582 REVERSE LENGTH=179
Repeat List (scaffold82)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57230.1	5	165	165	81.81	161	84	4e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9MU83_POPTR	19	179	179	89.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57230.1	5	165	165	79.39	161	82	5e-77
Target_name	Start	End	Length	Cov(%)
AT4G19003.2	19	179	179	89.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold82	Augus-PASA	mRNA	241007	242717	.	-	.	ID=Dca57230.1;Parent=Dca57230
scaffold82	Augus-PASA	exon	241007	241128	.	-	.	ID=Dca57230.1.exon1;Parent=Dca57230.1
scaffold82	Augus-PASA	exon	241662	241737	.	-	.	ID=Dca57230.1.exon2;Parent=Dca57230.1
scaffold82	Augus-PASA	exon	241831	241919	.	-	.	ID=Dca57230.1.exon3;Parent=Dca57230.1
scaffold82	Augus-PASA	exon	242003	242056	.	-	.	ID=Dca57230.1.exon4;Parent=Dca57230.1
scaffold82	Augustus	exon	242561	242717	.	-	.	ID=Dca57230.1.exon5;Parent=Dca57230.1