Carnation DB

Dca5727.1

Annotation

8-exons
f-1
sp|B9FAX3_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_09288#GO:0005524;GO:0017111;GO:0019204;GO:0016740#4F0P0C
AT5G66005.3 | Symbols: | Expressed protein | chr5:26397864-26399123 REVERSE LENGTH=192
Repeat List (scaffold1220)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5727.1	5	191	344	34.88	187	65	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|B9FAX3_ORYSJ	6	192	193	96.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5727.1	1	182	344	29.65	182	57	3e-58
Target_name	Start	End	Length	Cov(%)
AT5G66005.3	1	182	192	94.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1220	Augustus	mRNA	48667	52104	.	-	.	ID=Dca5727.1;Parent=Dca5727
scaffold1220	Augustus	exon	48667	48770	.	-	.	ID=Dca5727.1.exon1;Parent=Dca5727.1
scaffold1220	Augustus	exon	48857	49189	.	-	.	ID=Dca5727.1.exon2;Parent=Dca5727.1
scaffold1220	Augustus	exon	49364	49498	.	-	.	ID=Dca5727.1.exon3;Parent=Dca5727.1
scaffold1220	Augustus	exon	50005	50161	.	-	.	ID=Dca5727.1.exon4;Parent=Dca5727.1
scaffold1220	Augustus	exon	51367	51451	.	-	.	ID=Dca5727.1.exon5;Parent=Dca5727.1
scaffold1220	Augustus	exon	51664	51754	.	-	.	ID=Dca5727.1.exon6;Parent=Dca5727.1
scaffold1220	Augustus	exon	51876	51963	.	-	.	ID=Dca5727.1.exon7;Parent=Dca5727.1
scaffold1220	Augustus	exon	52063	52104	.	-	.	ID=Dca5727.1.exon8;Parent=Dca5727.1