Dca5729.1
Annotation
- 4-exons
- f-1
- sp|B2BXI0_ARALL#Gag-pol polymerase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=GagPol1#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1220)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5729.1 |
1 |
180 |
257 |
47.47 |
180 |
66 |
6e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXI0_ARALL |
765 |
951 |
1034 |
18.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5729.1 |
8 |
134 |
257 |
24.51 |
127 |
50 |
4e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
926 |
1052 |
1428 |
8.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1220 |
Augustus |
mRNA |
62284 |
64042 |
. |
+ |
. |
ID=Dca5729.1;Parent=Dca5729 |
| scaffold1220 |
Augustus |
exon |
62284 |
62688 |
. |
+ |
. |
ID=Dca5729.1.exon1;Parent=Dca5729.1 |
| scaffold1220 |
Augustus |
exon |
63489 |
63665 |
. |
+ |
. |
ID=Dca5729.1.exon2;Parent=Dca5729.1 |
| scaffold1220 |
Augustus |
exon |
63751 |
63809 |
. |
+ |
. |
ID=Dca5729.1.exon3;Parent=Dca5729.1 |
| scaffold1220 |
Augustus |
exon |
63910 |
64042 |
. |
+ |
. |
ID=Dca5729.1.exon4;Parent=Dca5729.1 |
