Carnation DB

Dca57306.1

Annotation

5-exons
f-1
sp|F6GT59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06580#GO:0016020;GO:0006886;GO:0016192#0F2P1C
sp|B9RLV4_RICCO#Vesicle transport V-snare protein vti1a, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1471210#GO:0016020;GO:0006886;GO:0016192#0F2P1C
Repeat List (scaffold820)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57306.1	1	220	220	75.45	220	76	5e-97
Target_name	Start	End	Length	Cov(%)
sp\|F6GT59_VITVI	1	221	221	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57306.1	1	220	220	70	220	70	2e-85
Target_name	Start	End	Length	Cov(%)
Os01t0707300-01	1	221	222	99.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold820	Augus-PASA	mRNA	162127	165546	.	-	.	ID=Dca57306.1;Parent=Dca57306
scaffold820	Augus-PASA	exon	162127	162279	.	-	.	ID=Dca57306.1.exon1;Parent=Dca57306.1
scaffold820	Augus-PASA	exon	163102	163272	.	-	.	ID=Dca57306.1.exon2;Parent=Dca57306.1
scaffold820	Augus-PASA	exon	163561	163746	.	-	.	ID=Dca57306.1.exon3;Parent=Dca57306.1
scaffold820	Augus-PASA	exon	163851	163909	.	-	.	ID=Dca57306.1.exon4;Parent=Dca57306.1
scaffold820	Augustus	exon	165453	165546	.	-	.	ID=Dca57306.1.exon5;Parent=Dca57306.1