Carnation DB

Dca57324.1

Annotation

5-exons
f-1
sp|F6H758_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01130#unknown#0F0P0C
Os08t0543600-01 Alpha-isopropylmalate/homocitrate synthase, conserved site domain containing protein.
Repeat List (scaffold821)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57324.1	28	190	203	45.32	163	56	4e-42
Target_name	Start	End	Length	Cov(%)
sp\|F6H758_VITVI	22	185	875	18.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57324.1	20	190	203	38.42	171	45	2e-27
Target_name	Start	End	Length	Cov(%)
AT5G53620.1	17	177	682	23.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold821	Augustus	mRNA	27482	29514	.	+	.	ID=Dca57324.1;Parent=Dca57324
scaffold821	Augustus	exon	27482	27616	.	+	.	ID=Dca57324.1.exon1;Parent=Dca57324.1
scaffold821	Augustus	exon	27720	27770	.	+	.	ID=Dca57324.1.exon2;Parent=Dca57324.1
scaffold821	Augustus	exon	28905	29146	.	+	.	ID=Dca57324.1.exon3;Parent=Dca57324.1
scaffold821	Augustus	exon	29231	29327	.	+	.	ID=Dca57324.1.exon4;Parent=Dca57324.1
scaffold821	Augustus	exon	29428	29514	.	+	.	ID=Dca57324.1.exon5;Parent=Dca57324.1