Dca57380.1
Annotation
- 4-exons
- f-1
- sp|B4FZ33_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#unknown#0F0P0C
- sp|Q9FRJ2_ORYSJ#Putative copia-like retrotransposon polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0064P21.11#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold823)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57380.1 |
10 |
249 |
249 |
63.05 |
240 |
52 |
1e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B4FZ33_MAIZE |
154 |
456 |
526 |
57.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57380.1 |
49 |
221 |
249 |
32.93 |
173 |
48 |
6e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00810.1 |
54 |
225 |
240 |
71.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold823 |
Augustus |
mRNA |
76297 |
77933 |
. |
+ |
. |
ID=Dca57380.1;Parent=Dca57380 |
| scaffold823 |
Augustus |
exon |
76297 |
76340 |
. |
+ |
. |
ID=Dca57380.1.exon1;Parent=Dca57380.1 |
| scaffold823 |
Augustus |
exon |
76468 |
76586 |
. |
+ |
. |
ID=Dca57380.1.exon2;Parent=Dca57380.1 |
| scaffold823 |
Augustus |
exon |
76685 |
76735 |
. |
+ |
. |
ID=Dca57380.1.exon3;Parent=Dca57380.1 |
| scaffold823 |
Augustus |
exon |
77398 |
77933 |
. |
+ |
. |
ID=Dca57380.1.exon4;Parent=Dca57380.1 |
