Dca57388.1
Annotation
- 3-exons
- f-1
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold8232)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57388.1 |
140 |
581 |
603 |
27.86 |
442 |
36 |
6e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QQV8_ORYSJ |
974 |
1447 |
1621 |
29.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8232 |
Augustus |
mRNA |
3076 |
5474 |
. |
- |
. |
ID=Dca57388.1;Parent=Dca57388 |
| scaffold8232 |
Augustus |
exon |
3076 |
3380 |
. |
- |
. |
ID=Dca57388.1.exon1;Parent=Dca57388.1 |
| scaffold8232 |
Augustus |
exon |
3455 |
4544 |
. |
- |
. |
ID=Dca57388.1.exon2;Parent=Dca57388.1 |
| scaffold8232 |
Augustus |
exon |
5058 |
5474 |
. |
- |
. |
ID=Dca57388.1.exon3;Parent=Dca57388.1 |
