Carnation DB

Dca57410.1

Annotation

19-exons
f-1
sp|B9HIV4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564455#GO:0005524;GO:0051082;GO:0006457#2F1P0C
Os08t0487800-01 Similar to Heat-shock protein precursor.
Repeat List (scaffold824)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57410.1	1	797	797	80.3	797	80	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HIV4_POPTR	1	791	791	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57410.1	1	797	797	78.29	797	79	0
Target_name	Start	End	Length	Cov(%)
AT2G04030.1	1	780	780	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold824	Augustus	mRNA	64252	70950	.	+	.	ID=Dca57410.1;Parent=Dca57410
scaffold824	Augustus	exon	64252	64530	.	+	.	ID=Dca57410.1.exon1;Parent=Dca57410.1
scaffold824	Augustus	exon	65755	65828	.	+	.	ID=Dca57410.1.exon2;Parent=Dca57410.1
scaffold824	Augustus	exon	66042	66167	.	+	.	ID=Dca57410.1.exon3;Parent=Dca57410.1
scaffold824	Augustus	exon	66253	66346	.	+	.	ID=Dca57410.1.exon4;Parent=Dca57410.1
scaffold824	Augustus	exon	66435	66518	.	+	.	ID=Dca57410.1.exon5;Parent=Dca57410.1
scaffold824	Augustus	exon	66624	66767	.	+	.	ID=Dca57410.1.exon6;Parent=Dca57410.1
scaffold824	Augustus	exon	66980	67096	.	+	.	ID=Dca57410.1.exon7;Parent=Dca57410.1
scaffold824	Augustus	exon	67244	67291	.	+	.	ID=Dca57410.1.exon8;Parent=Dca57410.1
scaffold824	Augustus	exon	67376	67456	.	+	.	ID=Dca57410.1.exon9;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	67580	67684	.	+	.	ID=Dca57410.1.exon10;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	67773	67913	.	+	.	ID=Dca57410.1.exon11;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	68751	68843	.	+	.	ID=Dca57410.1.exon12;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	68960	69037	.	+	.	ID=Dca57410.1.exon13;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	69116	69370	.	+	.	ID=Dca57410.1.exon14;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	69464	69566	.	+	.	ID=Dca57410.1.exon15;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	69658	69832	.	+	.	ID=Dca57410.1.exon16;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	69922	70027	.	+	.	ID=Dca57410.1.exon17;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	70555	70644	.	+	.	ID=Dca57410.1.exon18;Parent=Dca57410.1
scaffold824	Augus-PASA	exon	70750	70950	.	+	.	ID=Dca57410.1.exon19;Parent=Dca57410.1